Author Topic: Genographic Project  (Read 364 times)

Offline CptTrips

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Genographic Project
« on: April 17, 2008, 10:21:06 PM »
For those of you who have expressed an interest…

So I received my 2 DNA sample kits from National Geographic.  It comes with some interesting literature, various informational, legal notices, and a DVD containing a copy of the documentary that some of you may have seen on the History Channel about the beginnings of this project.  Also in each kit are 2 sample swabs and 2 sample vials and a padded return mailing envelope (not shown here because I already sent them).



The samples are take with a textured swab with which you scrape cells off the inside of your cheek (no, it’s not painful).  The swabs have a neat gizmo that lets you eject their tips into the sample vials without having to touch them to reduce the possibility of contamination.  Each kit requires you to collect 2 samples, eight hours apart. Both samples are sent in and cross-checked to ensure proper data.

For a single kit, you can only trace back either the Paternal or Maternal DNA markers.  I had ordered 2 kits to trace both lines, so ended up gathering 4 samples in all.  Each kit comes with a serial number that you will use to log into their website and track the processing and view the results.  It’s an ongoing project and over time its possible that more information and detail will come to light about your blood groups as data is continued to be gathered around the world.

There are 3 basic phases you track your samples through:

1. ARRIVAL AND BATCH CREATION
The kits are received at the Houston office of Family Tree DNA and checked in. All of the kits are assigned to a batch and shipped to the Arizona Research Labs at the University of Arizona. The samples are received at the university and the orders are transferred to a computer system. The computer sorts the orders and assigns each sample to a specific location in one of many sample grids As the barcodes on the samples are read the computer directs the researchers where to place each sample (which tray and which coordinates).

2. DNA ISOLATION
The cells are broken open by incubation with a protein-cutting enzyme overnight. Chemicals and the samples are transferred into deep well blocks for robotic DNA isolation. The blocks of chemicals and samples are placed on the extraction robot. The robotic DNA isolation uses silica-coated iron beads. In the presence of the appropriate chemicals DNA will bind to silica. The robot then uses magnetic probes to collect the beads (and DNA) and transfer them through several chemical washes and finally into a storage buffer, which allows the beads to release the DNA. At this point the beads are collected and discarded.

3. DNA ANALYSIS AND QUALITY CONTROL
The samples are transferred into PCR amplification plates for testing using a robotic liquid handling station. The appropriate chemicals are added to the samples to amplify the targeted regions of the DNA for testing. The samples are heated and cooled in a thermal cycler in order to run the PCR amplification. The PCR amplification products are loaded into the capillary electrophoresis machine and the products are sorted by size and color.
A laboratory staff member uses a computer program to assign scores to the samples. The computer generated scores are then reviewed by two additional laboratory staff members to produce finalized data.

My samples are currently at step 1.  They’ve arrived and have been batched.

I'll post results as I get them.

http://www.NationalGeographic.com/Genographic


Regards,
Wab



« Last Edit: April 17, 2008, 10:22:53 PM by AKWabbit »
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Offline 68ZooM

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Re: Genographic Project
« Reply #1 on: April 17, 2008, 10:35:48 PM »
Next procedure is installing the microchip  :O
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Offline AKIron

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Re: Genographic Project
« Reply #2 on: April 18, 2008, 09:54:44 AM »
Interesting. Did you have some idea where your distant ancestors lived? Keep us posted.
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Offline Jackal1

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Re: Genographic Project
« Reply #3 on: April 18, 2008, 09:57:17 AM »
Next procedure is installing the microchip  :O

Close to what I was thinking.
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Offline CptTrips

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Re: Genographic Project
« Reply #4 on: April 18, 2008, 05:12:24 PM »
Interesting. Did you have some idea where your distant ancestors lived? Keep us posted.

Not really.  I suspect it will simply tell me what I can already guess from the map on their public site.  I'm sure I'll just be on the main line going into Europe that 90% of us white guys are are members of.

Still its an interesting thing to be a part of.  The money goes toward helping them continue the research and your DNA provides them an extra data point.

I'll post the results when I get them.

Ciao,
Wab
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Offline Darkish

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Re: Genographic Project
« Reply #5 on: April 18, 2008, 05:30:39 PM »
Nice project - do prost rabbit with your county

Offline Xargos

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Re: Genographic Project
« Reply #6 on: April 18, 2008, 07:31:30 PM »
I'm sure I'll just be on the main line going into Europe that 90% of us white guys are are members of.


If your family has been in America for any length of time, you might not be as White as you think.
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Offline thrila

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Re: Genographic Project
« Reply #7 on: April 18, 2008, 08:04:56 PM »
Did you have to pay for much the kits?  There is no reason why they cant use the ampified DNA via PCR to trace your maternal and paternal relatives, they can use the same swab.  You can train a monkey to perform PCR, i've done it plenty myself.  Though i admit it is interesting, i would even consider doing it too.  It would be nice to know my origins.

What i would like to know is if i'm one of the lucky 1% of north europeans resistant to HIV and the geographic origin of the mutation
« Last Edit: April 18, 2008, 08:07:23 PM by thrila »
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