didnt the IX have the option to have .50s and 20mm originally in the game? and historiclly?
Yes and no.
The e wing introduced in 1944 has a 20mm cannon and a .50 caliber machine gun in each wing. The universal wing introduced in 1941 (IIRC) could take four .303s in each wing, or two .303s and one Hispano Mk II in each wing or two Hispano Mk IIs in each wing. In practice the universal wing always carried two .303s and one Hispano Mk II in each wing. In AH the Spitfire Mk VIII, Spitfire Mk IX and Seafire Mk II have universal wings and the the Spitfire Mk XIV and Spitfire Mk XVI have e wings. The Spitfire Mk I has an a wing and the Spitfire Mk V has a b wing.
The Spitfire Mk IX in AH has always been a Merlin 61 version, the earliest Mk IX introduced in mid 1942 and no Merlin 61 Spitfire IX ever had the e wing so when the Spitfires were redone and additional versions added the e wing options (.50s, 250lb bombs and rockets) were removed from the Mk IX to make it more accurate.